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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29337621_29338899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29337621 - 29338899

Intron Length:

1279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTTGC

5'SS Class:

major

3'SS Sequence:

TTTTTGCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TCTTGTATAAAA

Flanking Amino Acid:

IYWSMYQSLQGNDLLEDSPY

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

64.3

43.1

Major BPS

74.2

0.6

0.9

75.7

Major PPT

83.8

0.76

0.7

82.3

29.8

Minor 5ss

-1.2

43.8

Minor BPS

48.2

-0.1

2.1

65.1

41.5

Associated Gene:

Gene:

GFRA1

Ensembl Gene ID:

ENSAPLG00000007711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008010

29201892 - 29351717

149826

ENSAPLT00000008008

29201892 - 29351494

149603