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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29339203_29340267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29339203 - 29340267

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

TCAAAGAGAGTT

Flanking Amino Acid:

ALLYFALPLVDVLLSAEVSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

83.6

0.76

0.7

76.9

31.8

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

30.8

-1.3

2.1

44.6

39.6

Associated Gene:

Gene:

GFRA1

Ensembl Gene ID:

ENSAPLG00000007711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008010

29201892 - 29351717

149826