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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2938359_2939553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2938359 - 2939553

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATT

Flanking Amino Acid:

PLSLFDDDEEDLFGVVPAKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.3

0.52

1.1

76.5

36.9

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

0.99

87.87

31.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021760

2936024 - 2952849

16826

ENSAPLT00000004317

2936055 - 2956553

20499