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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2939671_2940507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2939671 - 2940507

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGAAG

5'SS Class:

major

3'SS Sequence:

CCTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TGTTCCTTATTT

Flanking Amino Acid:

SSLLFSSDEEEHWNVSKPPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

71.5

39.9

Major BPS

78.8

0.72

67.9

40.1

Major PPT

86.3

0.82

0.8

83.9

30.7

Minor 5ss

31.7

-2.1

3.1

39.3

46.2

Minor BPS

75.6

0.88

1.5

88.81

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004317

2936055 - 2956553

20499

ENSAPLT00000021760

2936024 - 2952849

16826