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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29402657_29403719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29402657 - 29403719

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTGCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAGGTCTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.1

0.66

0.9

78.1

36.2

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

0.27

1.5

69.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037616

29401797 - 29417472

15676

ENSAPLT00000037313

29401797 - 29417472

15676