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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29410440_29410520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29410440 - 29410520

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTACATATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTACATATTT

Flanking Amino Acid:

THAGHLFFDFAPGILQTCGH

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

77.7

0.62

0.9

74.4

39.5

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

54.9

0.23

82.1

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037616

29401797 - 29417472

15676

ENSAPLT00000037313

29401797 - 29417472

15676