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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2942343_2943352_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2942343 - 2943352

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGGTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTATTT

Flanking Amino Acid:

DVAGQHTKEKPFAATSLEPE

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

75.1

35.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

55.5

0.12

1.8

65.5

45.1

Minor 5ss

39.7

-1.2

3.5

55.6

43.2

Minor BPS

59.9

0.39

1.7

79.07

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021760

2936024 - 2952849

16826

ENSAPLT00000004317

2936055 - 2956553

20499