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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2943533_2944756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2943533 - 2944756

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTTTTCATT

Flanking Amino Acid:

TKNAQKEIGVPSKKSTRPKS

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

75.8

35.2

Major BPS

100

1.24

0.5

100

Major PPT

86.7

0.83

0.7

84.4

23.5

Minor 5ss

32.5

-2

Minor BPS

61.6

0.45

1.7

79.54

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021760

2936024 - 2952849

16826

ENSAPLT00000004317

2936055 - 2956553

20499