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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29477190_29478632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29477190 - 29478632

Intron Length:

1443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTACGTATC

5'SS Class:

major

3'SS Sequence:

TGTTTCTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTTTCCTTATTG

Flanking Amino Acid:

PTIDQIVQHLSDVFDKPEVT

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

71.9

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

77.2

0.61

0.9

72.9

37.5

Minor 5ss

41.1

-1

55.7

36.7

Minor BPS

74.6

0.63

1.6

79.24

37.7

Associated Gene:

Gene:

HSPA12A

Ensembl Gene ID:

ENSAPLG00000009823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037906

29475191 - 29532713

57523

ENSAPLT00000032768

29476555 - 29571712

95158

ENSAPLT00000010255

29476555 - 29529879

53325