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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29480251_29481047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29480251 - 29481047

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTGTTTGTAATG

Flanking Amino Acid:

GHLKELYKATGGPYGSLGVD

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

73.3

0.52

67.2

42.9

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

51.4

-0

61.75

41.5

Associated Gene:

Gene:

HSPA12A

Ensembl Gene ID:

ENSAPLG00000009823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037906

29475191 - 29532713

57523

ENSAPLT00000032768

29476555 - 29571712

95158

ENSAPLT00000010255

29476555 - 29529879

53325