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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29481153_29481714_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29481153 - 29481714

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTCC

5'SS Class:

major

3'SS Sequence:

TTTGTCAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTTTGTCAAACC

Flanking Amino Acid:

IGEIWSELEEGDRYIVVDSG

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

60.3

39.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

67.8

0.4

1.1

61.1

43.8

Minor 5ss

36.7

-1.5

3.5

50.9

45.8

Minor BPS

44.9

-0.4

2.3

62.23

43.8

Associated Gene:

Gene:

HSPA12A

Ensembl Gene ID:

ENSAPLG00000009823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037906

29475191 - 29532713

57523

ENSAPLT00000032768

29476555 - 29571712

95158

ENSAPLT00000010255

29476555 - 29529879

53325