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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2948980_2949667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2948980 - 2949667

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATTACT

5'SS Class:

major

3'SS Sequence:

CTCTATTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTCTCTATTT

Flanking Amino Acid:

EPSSRIGKLQANLAINPAAL

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

80.1

32.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

80.9

0.7

0.8

76.5

31.8

Minor 5ss

40.2

-1.1

2.8

53.3

37.2

Minor BPS

60.6

0.41

1.9

84.33

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021760

2936024 - 2952849

16826

ENSAPLT00000004317

2936055 - 2956553

20499