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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29519439_29532685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29519439 - 29532685

Intron Length:

13247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

TGTTTACTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTTGTTTACTT

Flanking Amino Acid:

MSESEGGAADAVSTSTYSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

55.2

Major BPS

71.4

0.53

1.1

63.4

Major PPT

85.1

0.79

0.8

82.1

34.6

Minor 5ss

28.8

-2.4

3.4

38.1

46.9

Minor BPS

60.1

0.39

82.98

39.3

Associated Gene:

Gene:

HSPA12A

Ensembl Gene ID:

ENSAPLG00000009823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037906

29475191 - 29532713

57523