Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_29582876_29584132_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29582876 - 29584132

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTT

5'SS Class:

major

3'SS Sequence:

TGTTTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTCTTTTGAAGA

Flanking Amino Acid:

IPPAQLSLRQGIERVLDIQK

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.5

39.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

41.7

-0.9

3.6

64.7

46.6

Minor BPS

54.3

0.13

1.7

40.1

Associated Gene:

Gene:

ENO4

Ensembl Gene ID:

ENSAPLG00000010075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047430

29576064 - 29603102

27039

ENSAPLT00000010496

29576064 - 29594299

18236