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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_29585003_29586390_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
29585003 - 29586390
Intron Length:
1388

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CCG|GTAAGAAAA
5'SS Class:
strong_major
3'SS Sequence:
GTTTTATTTCTAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TTTGTTTTATTT
Flanking Amino Acid:
KAHNTGKKAPPPALKRVSHL
Intron Amino Acid Position:
344

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.7
0.79
0.9
77.3
32.8
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
82
0.72
0.8
74.4
40.4
Minor 5ss
33.3
-1.9
2.9
41.3
44.8
Minor BPS
59.9
0.39
1.6
78.46
39

Associated Gene:

Gene:
ENO4
Ensembl Gene ID:
ENSAPLG00000010075
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000047430
29576064 - 29603102
27039
ENSAPLT00000010496
29576064 - 29594299
18236