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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29590496_29591448_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
29590496 - 29591448

Intron Length:
953

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTGAGTAAA

5'SS Class:
strong_major

3'SS Sequence:
CTGTTATATATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAT

U12 Branch Point Sequence:
TATATACTAATG

Flanking Amino Acid:
DLIEFTGLLDGQRHITILGS

Intron Amino Acid Position:
507

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.7
0.84
0.8
81.1
26.8

Major BPS
86.7
0.91
0.7
84.2
21.8

Major PPT
71.2
0.48
1
66.1
39.1

Minor 5ss
29.7
-2.3
2.6
30.1
36.9

Minor BPS
46.1
-0.4
1.9
55.17
39.8

Associated Gene:

Gene:
ENO4

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29576064 - 29603102
27039

29576064 - 29594299
18236