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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_29591517_29592045_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
29591517 - 29592045
Intron Length:
529

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAAGTATT
5'SS Class:
strong_major
3'SS Sequence:
TTCTTGTTTTAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
TAGTTTTAAAAT
Flanking Amino Acid:
ESSDDSLVDLAVGLGARFIK
Intron Amino Acid Position:
530

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.1
0.99
0.8
92.6
23.1
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
78
0.63
1
82.5
32.9
Minor 5ss
41.8
-0.9
2.9
57.3
41.2
Minor BPS
52.4
0.15
1.7
69.43
41.8

Associated Gene:

Gene:
ENO4
Ensembl Gene ID:
ENSAPLG00000010075
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010496
29576064 - 29594299
18236