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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_29591517_29594075_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
29591517 - 29594075
Intron Length:
2559

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAAGTATT
5'SS Class:
strong_major
3'SS Sequence:
TCTTCTGTTACAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
CAAACAT
U12 Branch Point Sequence:
TCTTCTGTTACA
Flanking Amino Acid:
ESSDDSLVDLGLKQILNFLI
Intron Amino Acid Position:
530

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.1
0.99
0.8
92.6
23.1
Major BPS
50.9
0.02
1.1
59
36.1
Major PPT
85
0.79
0.8
79.4
32.6
Minor 5ss
41.8
-0.9
2.9
57.3
41.2
Minor BPS
51.2
0.03
2.3
70.62
41.9

Associated Gene:

Gene:
ENO4
Ensembl Gene ID:
ENSAPLG00000010075
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000047430
29576064 - 29603102
27039