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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29604814_29605686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29604814 - 29605686

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

CTTTGGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

AAGCATTAAACT

Flanking Amino Acid:

RKVTTDQDSGGPTGILATSE

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

70.2

0.5

71.6

30.1

Major PPT

72.5

0.51

69.2

41.8

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

47.3

-0.1

1.8

61.97

41.7

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010851

29598148 - 29654496

56349

ENSAPLT00000029516

29595616 - 29654496

58881