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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29605808_29608014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29605808 - 29608014

Intron Length:

2207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGCCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CTTTTCAAACCT

Flanking Amino Acid:

SAMKELKGILETLNKSTSSR

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

80.4

0.68

0.8

76.8

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

46.8

-0.1

2.2

71.76

45.4

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029516

29595616 - 29654496

58881

ENSAPLT00000010851

29598148 - 29654496

56349