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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29608069_29608743_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29608069 - 29608743

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGGAAT

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTTTTAACC

Flanking Amino Acid:

VNQSSRPKTKPETPKPSESA

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

72.5

38.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

85.9

0.81

0.9

79.9

37.7

Minor 5ss

36.4

-1.5

48.6

47.3

Minor BPS

79.9

0.92

82.49

30.8

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029516

29595616 - 29654496

58881

ENSAPLT00000010851

29598148 - 29654496

56349