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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29608854_29611448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29608854 - 29611448

Intron Length:

2595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GATTTTGGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTTCTTTGATT

Flanking Amino Acid:

KKEKPPQQESGEEVTDLKRQ

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

0.85

0.9

39.9

Major PPT

62.9

0.29

1.1

58.2

46.1

Minor 5ss

41.4

-1

3.3

58.6

46.2

Minor BPS

77.8

0.96

87.51

31.6

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029516

29595616 - 29654496

58881

ENSAPLT00000010851

29598148 - 29654496

56349