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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29611532_29613173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29611532 - 29613173

Intron Length:

1642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTTCCTCAAAG

Flanking Amino Acid:

LPPPPPPNPIRSLMSMIRKR

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

85.6

31.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

71.4

0.48

71.8

32.5

Minor 5ss

39.1

-1.2

3.4

45.5

Minor BPS

70.2

0.5

1.7

77.48

39.2

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029516

29595616 - 29654496

58881

ENSAPLT00000010851

29598148 - 29654496

56349