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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29613280_29614173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29613280 - 29614173

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTGCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCTTGCACA

Flanking Amino Acid:

EEKARDLKHTVDELQKRVHQ

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

73.8

30.8

Major BPS

100

1.24

0.5

100

Major PPT

83.1

0.74

0.8

79.7

32.4

Minor 5ss

37.6

-1.4

3.1

48.6

47.1

Minor BPS

62.9

0.4

1.9

80.01

36.1

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029516

29595616 - 29654496

58881

ENSAPLT00000010851

29598148 - 29654496

56349