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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29629368_29632167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29629368 - 29632167

Intron Length:

2800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCAAACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CCTTCCTCAAAC

Flanking Amino Acid:

NSVHCQQQIKELRDQIISVH

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

85.2

32.2

Major BPS

100

1.24

0.5

100

Major PPT

67.5

0.39

0.9

59.2

35.5

Minor 5ss

42.3

-0.9

3.5

64.1

47.4

Minor BPS

60.8

0.32

1.7

67.84

43.5

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029516

29595616 - 29654496

58881

ENSAPLT00000010851

29598148 - 29654496

56349