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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29634571_29639115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29634571 - 29639115

Intron Length:

4545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCCTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TAATGTTTAAAT

Flanking Amino Acid:

AVKKLEEFQKISHMVIEEVN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

74.5

0.55

0.8

66.7

34.9

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

58.6

0.35

1.9

75.33

Associated Gene:

Gene:

SHTN1

Ensembl Gene ID:

ENSAPLG00000010399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010851

29598148 - 29654496

56349

ENSAPLT00000029516

29595616 - 29654496

58881