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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29656231_29661735_R

Intron Information:

Intron Rank:

136583

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29656231 - 29661735

Intron Length:

5505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTCCGGTTGAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TGTCACAGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

81.3

32.8

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

57.1

0.16

1.2

58.4

41.2

Minor 5ss

38.5

-1.3

51.2

45.7

Minor BPS

48.1

-0.1

1.9

65.54

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037144

29654645 - 29662311

7667