Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_2971318_2972162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2971318 - 2972162

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCTG

5'SS Class:

major

3'SS Sequence:

TGTTTTTTAATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

KMENMNLSKKPKKTVKVKPR

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.7

44.4

Major BPS

77.3

0.68

81.5

Major PPT

0.67

0.9

77.6

35.5

Minor 5ss

33.7

-1.9

3.5

46.7

48.6

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

ZFAND4

Ensembl Gene ID:

ENSAPLG00000003996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030400

2958520 - 3015887

57368

ENSAPLT00000004114

2958268 - 2979788

21521