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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29736565_29739429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29736565 - 29739429

Intron Length:

2865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTGT

U12 Branch Point Sequence:

TCTTTGTTCAAG

Flanking Amino Acid:

FFCCTVFTTVGYGNTYPVTR

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

33.2

-1

4.2

59.6

46.8

Major PPT

0.5

1.1

70.5

39.1

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

43.8

-0.6

2.5

55.39

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011134

29735447 - 29740244

4798