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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29772903_29779079_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29772903 - 29779079

Intron Length:

6177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

CTATCCTGAAAA

Flanking Amino Acid:

TNPFIGPLTNRIGYQIPLFA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

69.6

0.49

59.5

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

63.4

0.42

1.6

70.85

40.7

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011179

29768096 - 29799368

31273

ENSAPLT00000044836

29769483 - 29799368

29886