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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29779139_29780225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29779139 - 29780225

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

GTCTTTTCCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTAATTTTAAAA

Flanking Amino Acid:

GFCIMFVSTIMFAFSGSYTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

64.6

40.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.7

0.6

0.8

72.4

32.4

Minor 5ss

35.2

-1.7

3.3

49.2

41.2

Minor BPS

55.4

0.17

1.4

61.55

38.5

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273