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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29780310_29782836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29780310 - 29782836

Intron Length:

2527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTGTTCTATTC

Flanking Amino Acid:

GVGSSCSSVAGMGMLASVYT

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

77.3

0.61

0.9

74.7

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

46.3

-0.3

1.9

61.68

38.7

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273