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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29783495_29783601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29783495 - 29783601

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTTCTTTCCACA

Flanking Amino Acid:

VLAALALLDGAVQLFVLQPS

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

-0

1.9

68.33

38.3

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273