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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29783646_29783724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29783646 - 29783724

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTTTCCTAATCC

Flanking Amino Acid:

VLQPSRAQAESQKGTPLLTL

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

89.7

22.3

Major BPS

81.9

0.79

0.9

80.1

Major PPT

83.2

0.75

0.8

77.1

37.1

Minor 5ss

37.9

-1.4

51.7

39.1

Minor BPS

60.2

0.3

73.85

43.3

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273