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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29783786_29787219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29783786 - 29787219

Intron Length:

3434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGAT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TCTTTCTCCAAG

Flanking Amino Acid:

LKDPYIIIAAGSICFANMAI

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

66.2

39.8

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

75.4

0.57

75.1

33.6

Minor 5ss

36.6

-1.5

3.7

55.8

48.4

Minor BPS

-0.4

2.1

56.14

45.3

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273