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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29787316_29789932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29787316 - 29789932

Intron Length:

2617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAGTAC

5'SS Class:

major

3'SS Sequence:

TCATATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TCATTCATATTT

Flanking Amino Acid:

ETMCSKKWQLGVAFLPASIS

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

65.1

35.2

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

83.1

0.75

0.8

80.7

36.3

Minor 5ss

36.5

-1.5

3.4

44.9

Minor BPS

49.5

0.04

1.8

42.3

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273