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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29790012_29790256_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29790012 - 29790256

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

AGGCACTGAAGT

Flanking Amino Acid:

LFGILAHKMGRWLCALLGML

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.7

34.9

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

0.63

0.9

76.7

31.9

Minor 5ss

62.3

0.42

2.3

Minor BPS

45.1

-0.2

1.9

59.03

43.3

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273