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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29790817_29791250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29790817 - 29791250

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCATGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTTCTGAACT

Flanking Amino Acid:

APNFGVGFAIGMVDSSMMPI

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.8

29.7

Major BPS

82.1

0.8

71.6

36.4

Major PPT

61.5

0.26

54.4

39.3

Minor 5ss

27.5

-2.6

2.7

28.2

37.3

Minor BPS

82.4

1.1

1.2

96.74

27.7

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273