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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29791371_29796968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29791371 - 29796968

Intron Length:

5598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTATAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTATTTATAAAA

Flanking Amino Acid:

DVAFCMGFAIGPSAGGAIAK

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

66.7

0.38

1.2

69.3

39.5

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

56.3

0.2

1.7

70.09

35.6

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273