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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29797103_29799257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29797103 - 29799257

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

GTAATGTTCACG

Flanking Amino Acid:

RSPPAKEEKMAILMDHNCPV

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

74.5

41.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

85.2

0.79

0.6

81.1

Minor 5ss

43.1

-0.8

2.9

54.7

43.7

Minor BPS

-0.7

2.4

49.13

44.4

Associated Gene:

Gene:

SLC18A2

Ensembl Gene ID:

ENSAPLG00000010707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044836

29769483 - 29799368

29886

ENSAPLT00000011179

29768096 - 29799368

31273