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Intron Name: Anas_platyrhynchos_platyrhynchos_6_29807291_29809128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29807291 - 29809128

Intron Length:

1838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

ATCTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTCAAAT

Flanking Amino Acid:

QRGDRLLAIGSVKITSTVQV

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

77.2

32.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.6

0.78

0.7

80.3

31.1

Minor 5ss

34.1

-1.8

2.9

47.9

41.8

Minor BPS

55.8

0.26

1.6

72.55

Associated Gene:

Gene:

PDZD8

Ensembl Gene ID:

ENSAPLG00000022941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028149

29802918 - 29857383

54466