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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30020411_30049557_R

Intron Information:

Intron Rank:

138036

Intron Class:

major

Intron Phase:

Intron Coordinates:

30020411 - 30049557

Intron Length:

29147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCATCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

TCACCCTGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

73.4

0.53

0.9

65.8

35.6

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

52.1

0.04

1.8

61.78

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047967

30016115 - 30050000

33886

ENSAPLT00000037646

30014335 - 30050000

35666