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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30188396_30199697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30188396 - 30199697

Intron Length:

11302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TTTCTCCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

CACAGCTTAACT

Flanking Amino Acid:

IFEDKQRRKTEWFHLESRQG

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

65.6

34.4

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

79.4

0.66

0.9

83.7

Minor 5ss

28.8

-2.4

3.1

30.9

36.7

Minor BPS

56.5

0.28

1.9

69.59

46.9

Associated Gene:

Gene:

RAB11FIP2

Ensembl Gene ID:

ENSAPLG00000006278

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006509

30167798 - 30200050

32253