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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30277852_30278517_R

Intron Information:

Intron Rank:

141922

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30277852 - 30278517

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGCCATC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGTAT

U12 Branch Point Sequence:

TTTGTTGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.9

0.14

1.4

59.2

45.8

Major BPS

53.8

0.09

1.6

57.4

49.1

Major PPT

91.3

0.93

0.5

92.5

17.5

Minor 5ss

44.5

-0.6

43.6

Minor BPS

45.9

-0.2

2.2

70.13

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043400

30277617 - 30279310

1694