Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_30343935_30354740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30343935 - 30354740

Intron Length:

10806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATGT

Flanking Amino Acid:

ELSDRLAIRELGVKIAKAAA

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.4

0.64

0.9

77.4

36.6

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

49.2

0.02

1.9

66.05

45.6

Associated Gene:

Gene:

FAM204A

Ensembl Gene ID:

ENSAPLG00000006401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006630

30343322 - 30358840

15519