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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3036330_3063235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3036330 - 3063235

Intron Length:

26906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TGTTCCTGCAAT

Flanking Amino Acid:

MHSCWKMKLQNEKALGHSVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

86.8

0.83

0.7

84.4

23.4

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

55.2

0.25

2.1

79.39

Associated Gene:

Gene:

MARCHF8

Ensembl Gene ID:

ENSAPLG00000003953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004049

3036300 - 3084036

47737