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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3061279_3066042_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3061279 - 3066042

Intron Length:

4764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAGCTTCA

5'SS Class:

weak_major

3'SS Sequence:

AAGAGAAAAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTACAT

U12 Branch Point Sequence:

ACGCTGGTACAT

Flanking Amino Acid:

HPCPLSFSYILTFGWGWRPE

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.3

52.8

Major BPS

49.9

-0

1.4

60.7

45.9

Major PPT

41.7

-0.4

1.1

26.2

33.9

Minor 5ss

47.5

-0.2

2.9

Minor BPS

31.8

-1.3

2.4

43.67

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036598

3056356 - 3066103

9748