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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30717816_30721605_F

Intron Information:

Intron Rank:

149858

Intron Class:

major

Intron Phase:

Intron Coordinates:

30717816 - 30721605

Intron Length:

3790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGTAC

U12 Branch Point Sequence:

GTACGACGAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

49.9

-0

1.4

51.8

43.6

Major PPT

87.7

0.85

0.8

80.2

37.3

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

36.5

-1.1

2.1

42.17

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033966

30717709 - 30722501

4793