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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30738653_30741424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30738653 - 30741424

Intron Length:

2772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

AATTTAAATTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATAATT

Flanking Amino Acid:

LAVIKPPHLLQEKEEQHQLA

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

69.1

0.43

1.1

65.1

44.1

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

69.6

0.69

1.5

85.51

34.4

Associated Gene:

Gene:

EIF3A

Ensembl Gene ID:

ENSAPLG00000006637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006941

30727502 - 30756537

29036