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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30758870_30760073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30758870 - 30760073

Intron Length:

1204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TAGTAAAGAAGC

Flanking Amino Acid:

EVQESPVLKKVTHFSIVLTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

41.8

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

68.9

0.43

61.3

44.5

Minor 5ss

33.2

-1.9

3.4

48.6

47.1

Minor BPS

37.6

-0.9

2.1

48.11

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007825

30757847 - 30765061

7215